Q9Y2K7 | KDM2A_HUMAN | Lysine-specific demethylase 2A (KDM2A)

Pfam Domain Table

AccessionDomainRangeColor
PF02008zf-CXXC - CXXC zinc finger domain565~609
PF12937F-box-like - F-box-like896~935
PF16866PHD_4 - PHD-finger614~676
PF17811JHD - Jumonji helical domain304~342

3D structures mapped by conservation among orthologs

[ Domain: "Double-stranded beta-helix" // JmjC_1 ]

 PyMOL session

[ Domain: "F-box domain" // F-box-like_1 ]

 PyMOL session

[ Domain: "C-terminal helical domain in Jumonji domain-containing histone demethylases" // KOG1633_1 ]

 PyMOL session

[ Domain: "CXXC domain" // zf-CXXC ]

 PyMOL session

[ Domain: "FYVE/PHD zinc finger" // PHD ]

 PyMOL session


[ Alpha Fold Model ] (go)



Known binders annotated in ChEMBL

 IC50 CSV    Ki CSV
Only the first 20 rows are shown.
molecule_chembl_idstructureassay_typerelation valueunitmol_wtsmilesorganism assay_chembl_idbao_label
CHEMBL5173876 IC50 = 63.0 nM 325.32 O=C(O)/C=C/C(=O)NNC(=O)c1cnccc1Cc1ccccc1 Homo sapiens CHEMBL5216109 single protein format
CHEMBL4288093 IC50 = 100.0 nM 364.38 CCOc1cc(-c2c(-c3cc(-c4c[nH]nn4)ccn3)ncn2C)ccc1F Homo sapiens CHEMBL4256999 cell-based format
CHEMBL4294926 IC50 = 100.0 nM 336.79 Clc1ccccc1Cn1cnc(-c2cc(-c3c[nH]nn3)ccn2)c1 Homo sapiens CHEMBL4256999 cell-based format
CHEMBL4283409 IC50 = 100.0 nM 296.72 Clc1cccc(-n2cnc(-c3cc4[nH]nnc4cn3)c2)c1 Homo sapiens CHEMBL4256999 cell-based format
CHEMBL4292860 IC50 <= 100.0 nM 310.75 Clc1cccc(Cn2cnc(-c3cc4[nH]nnc4cn3)c2)c1 Homo sapiens CHEMBL4256999 cell-based format
CHEMBL4281332 IC50 <= 100.0 nM 310.75 Clc1ccccc1Cn1cnc(-c2cc3[nH]nnc3cn2)c1 Homo sapiens CHEMBL4256999 cell-based format
CHEMBL4286675 IC50 <= 100.0 nM 276.3 c1ccc(Cn2cnc(-c3cc4[nH]nnc4cn3)c2)cc1 Homo sapiens CHEMBL4256999 cell-based format
CHEMBL4282591 IC50 <= 100.0 nM 366.43 c1ccc2c(CCn3cnc(-c4cc(-c5c[nH]nn5)ccn4)c3)cccc2c1 Homo sapiens CHEMBL4256999 cell-based format
CHEMBL4287550 IC50 <= 100.0 nM 404.78 FC(F)(F)c1cccc(Cn2cnc(-c3cc(-c4c[nH]nn4)ccn3)c2)c1Cl Homo sapiens CHEMBL4256999 cell-based format
CHEMBL4288588 IC50 <= 100.0 nM 371.23 Clc1cccc(Cn2cnc(-c3cc(-c4c[nH]nn4)ccn3)c2)c1Cl Homo sapiens CHEMBL4256999 cell-based format
CHEMBL4294188 IC50 <= 100.0 nM 360.42 CCOc1ccccc1CCn1cnc(-c2cc(-c3c[nH]nn3)ccn2)c1 Homo sapiens CHEMBL4256999 cell-based format
CHEMBL4280770 IC50 <= 100.0 nM 356.43 c1ccc2c(c1)CCCC2Cn1cnc(-c2cc(-c3c[nH]nn3)ccn2)c1 Homo sapiens CHEMBL4256999 cell-based format
CHEMBL4279714 IC50 <= 100.0 nM 346.39 COc1ccccc1CCn1cnc(-c2cc(-c3c[nH]nn3)ccn2)c1 Homo sapiens CHEMBL4256999 cell-based format
CHEMBL4284883 IC50 <= 100.0 nM 350.81 Clc1ccccc1CCn1cnc(-c2cc(-c3c[nH]nn3)ccn2)c1 Homo sapiens CHEMBL4256999 cell-based format
CHEMBL4283877 IC50 <= 100.0 nM 316.37 CC(c1ccccc1)n1cnc(-c2cc(-c3c[nH]nn3)ccn2)c1 Homo sapiens CHEMBL4256999 cell-based format
CHEMBL4280474 IC50 <= 100.0 nM 390.42 Cn1cnc(-c2cc(-c3c[nH]nn3)ccn2)c1-c1ccc(F)cc1OCC1CC1 Homo sapiens CHEMBL4256999 cell-based format
CHEMBL4279899 IC50 <= 100.0 nM 310.75 Clc1ccc(Cn2cnc(-c3cc4[nH]nnc4cn3)c2)cc1 Homo sapiens CHEMBL4256999 cell-based format
CHEMBL4280949 IC50 <= 100.0 nM 345.19 Clc1ccc(Cn2cnc(-c3cc4[nH]nnc4cn3)c2)cc1Cl Homo sapiens CHEMBL4256999 cell-based format
CHEMBL4278748 IC50 <= 100.0 nM 296.72 Clc1ccc(-n2cnc(-c3cc4[nH]nnc4cn3)c2)cc1 Homo sapiens CHEMBL4256999 cell-based format
CHEMBL4279782 IC50 <= 100.0 nM 296.72 Clc1ccccc1-n1cnc(-c2cc3[nH]nnc3cn2)c1 Homo sapiens CHEMBL4256999 cell-based format