Q9UBC3 | DNM3B_HUMAN | DNA (cytosine-5)-methyltransferase 3B (DNMT3B)

Pfam Domain Table

AccessionDomainRangeColor
PF00145DNA_methylase - C-5 cytosine-specific DNA methylase575~707
PF00855PWWP - PWWP domain226~309
PF17980ADD_DNMT3 - DNMT3, cysteine rich ADD domain, GATA1-like zinc finger416~471
PF21255DNMT3_ADD_GATA1-like - DNMT3, ADD PHD zinc finger478~527

3D structures mapped by conservation among orthologs

[ Domain: "SH3" // PWWP ]

 PyMOL session


[ Alpha Fold Model ] (go)



Known binders annotated in ChEMBL

 IC50 CSV
Only the first 20 rows are shown.
molecule_chembl_idstructureassay_typerelation valueunitmol_wtsmilesorganism assay_chembl_idbao_label
CHEMBL555257 IC50 = 260.0 nM 576.68 O=C(O)[C@@H]1C[C@H](SC[C@H]2O[C@@H](n3cnc4c(NCCc5ccc(-c6ccccc6)cc5)ncnc43)[C@H](O)[C@@H]2O)CN1 Homo sapiens CHEMBL1036445 single protein format
CHEMBL418052 IC50 = 300.0 nM 384.42 Nc1ncnc2c1ncn2[C@@H]1O[C@H](CSCC[C@H](N)C(=O)O)[C@@H](O)[C@H]1O Homo sapiens CHEMBL1036409 cell-based format
CHEMBL557902 IC50 = 300.0 nM 396.43 Nc1ncnc2c1ncn2[C@@H]1O[C@H](CS[C@@H]2CN[C@H](C(=O)O)C2)[C@@H](O)[C@H]1O Homo sapiens CHEMBL1036445 single protein format
CHEMBL552309 IC50 = 300.0 nM 383.43 Nc1ncnc2c1ccn2[C@@H]1O[C@H](CSCC[C@H](N)C(=O)O)[C@@H](O)[C@H]1O Homo sapiens CHEMBL1036409 cell-based format
CHEMBL5178532 IC50 = 300.0 nM 402.47 Nc1nc(=O)n([C@H]2C[C@H](O)[C@@H](CO)O2)cc1CSCCCC[C@H](N)C(=O)O Homo sapiens CHEMBL5138548 cell-based format
CHEMBL2106789 IC50 = 500.0 nM 302.28 C[C@@H]1O[C@@H](CC(=O)O)CC2=C1C(=O)c1c(O)cccc1C2=O Homo sapiens CHEMBL3418014 cell-based format
CHEMBL555352 IC50 = 600.0 nM 564.67 NC(CCSC[C@H]1O[C@@H](n2cnc3c(NCCc4ccc(-c5ccccc5)cc4)ncnc32)[C@H](O)[C@@H]1O)C(=O)O Homo sapiens CHEMBL1036409 cell-based format
CHEMBL560105 IC50 = 600.0 nM 502.6 NC(CCSC[C@H]1O[C@@H](n2cnc3c(NCCCc4ccccc4)ncnc32)[C@H](O)[C@@H]1O)C(=O)O Homo sapiens CHEMBL1036409 cell-based format
CHEMBL560505 IC50 = 900.0 nM 534.6 COc1cc(CNc2ncnc3c2ncn3[C@@H]2O[C@H](CSCCC(N)C(=O)O)[C@@H](O)[C@H]2O)cc(OC)c1 Homo sapiens CHEMBL1036409 cell-based format
CHEMBL1564869 IC50 = 900.0 nM 334.33 O=C(O)[C@H](Cc1c[nH]c2ccccc12)N1C(=O)c2ccccc2C1=O Homo sapiens CHEMBL4606697 cell-based format
CHEMBL560045 IC50 = 1000.0 nM 398.45 Cc1nc(N)c2ncn([C@@H]3O[C@H](CSCCC(N)C(=O)O)[C@@H](O)[C@H]3O)c2n1 Homo sapiens CHEMBL1036409 cell-based format
CHEMBL556265 IC50 = 1000.0 nM 474.54 NC(CCSC[C@H]1O[C@@H](n2cnc3c(NCc4ccccc4)ncnc32)[C@H](O)[C@@H]1O)C(=O)O Homo sapiens CHEMBL1036409 cell-based format