Q8NHM5 | KDM2B_HUMAN | Lysine-specific demethylase 2B (KDM2B)

Pfam Domain Table

AccessionDomainRangeColor
PF02008zf-CXXC - CXXC zinc finger domain607~651
PF12937F-box-like - F-box-like1068~1107
PF13621Cupin_8 - Cupin-like domain141~317
PF16866PHD_4 - PHD-finger656~722
PF17811JHD - Jumonji helical domain334~373

3D structures mapped by conservation among orthologs

[ Domain: "Leucine-rich repeats" // LRR_8_3 ]

 PyMOL session

[ Domain: "F-box domain" // F-box-like_1 ]

 PyMOL session

[ Domain: "CXXC domain" // zf-CXXC ]

 PyMOL session

[ Domain: "FYVE/PHD zinc finger" // PHD_5 ]

 PyMOL session


[ Alpha Fold Model ] (go)



Known binders annotated in ChEMBL

 IC50 CSV
Only the first 20 rows are shown.
molecule_chembl_idstructureassay_typerelation valueunitmol_wtsmilesorganism assay_chembl_idbao_label
CHEMBL4284112 IC50 <= 100.0 nM 303.32 C#Cc1ccc(-c2c(-c3cc(C(=O)O)ccn3)ncn2C)cc1 Homo sapiens CHEMBL4257285 cell-based format
CHEMBL4283531 IC50 <= 100.0 nM 389.81 COCCCn1cnc(-c2cc(C(=O)O)ccn2)c1-c1ccc(Cl)c(F)c1 Homo sapiens CHEMBL4257285 cell-based format
CHEMBL4288587 IC50 <= 100.0 nM 359.79 CCCn1cnc(-c2cc(C(=O)O)ccn2)c1-c1ccc(Cl)c(F)c1 Homo sapiens CHEMBL4257285 cell-based format
CHEMBL4290844 IC50 <= 100.0 nM 348.19 Cn1cnc(-c2cc(C(=O)O)ccn2)c1-c1ccc(Cl)cc1Cl Homo sapiens CHEMBL4257285 cell-based format
CHEMBL4279368 IC50 <= 100.0 nM 343.77 COc1cc(-c2c(-c3cc(C(=O)O)ccn3)ncn2C)ccc1Cl Homo sapiens CHEMBL4257285 cell-based format
CHEMBL4285705 IC50 <= 100.0 nM 331.73 Cn1cnc(-c2cc(C(=O)O)ccn2)c1-c1ccc(Cl)c(F)c1 Homo sapiens CHEMBL4257285 cell-based format
CHEMBL4294329 IC50 <= 100.0 nM 381.74 Cn1cnc(-c2cc(C(=O)O)ccn2)c1-c1ccc(Cl)cc1C(F)(F)F Homo sapiens CHEMBL4257285 cell-based format
CHEMBL4293976 IC50 <= 100.0 nM 297.29 Cn1cnc(-c2cc(C(=O)O)ccn2)c1-c1cccc(F)c1 Homo sapiens CHEMBL4257285 cell-based format
CHEMBL4284008 IC50 <= 100.0 nM 297.29 Cn1cnc(-c2cc(C(=O)O)ccn2)c1-c1ccc(F)cc1 Homo sapiens CHEMBL4257285 cell-based format
CHEMBL4285037 IC50 <= 100.0 nM 318.34 Cn1cnc(-c2cc(C(=O)O)ccn2)c1-c1ccc2cc[nH]c2c1 Homo sapiens CHEMBL4257285 cell-based format
CHEMBL4284538 IC50 <= 100.0 nM 375.79 COCCn1cnc(-c2cc(C(=O)O)ccn2)c1-c1ccc(Cl)c(F)c1 Homo sapiens CHEMBL4257285 cell-based format
CHEMBL4280936 IC50 <= 100.0 nM 313.74 Cn1cnc(-c2cc(C(=O)O)ccn2)c1-c1cccc(Cl)c1 Homo sapiens CHEMBL4257285 cell-based format
CHEMBL4279120 IC50 <= 100.0 nM 313.74 Cn1cnc(-c2cc(C(=O)O)ccn2)c1-c1ccc(Cl)cc1 Homo sapiens CHEMBL4257285 cell-based format
CHEMBL4282684 IC50 <= 100.0 nM 426.4 FC(F)(F)c1[nH]nnc1-c1ccnc(-c2cn(CC3CCOc4ccccc43)cn2)c1 Homo sapiens CHEMBL4256998 cell-based format
CHEMBL4282314 IC50 <= 100.0 nM 388.33 Cn1cnc(-c2cc(-c3nn[nH]c3C(F)(F)F)ccn2)c1-c1ccc(F)cc1 Homo sapiens CHEMBL4256998 cell-based format
CHEMBL4278582 IC50 <= 100.0 nM 414.39 COc1ccc(CCn2cnc(-c3cc(-c4nn[nH]c4C(F)(F)F)ccn3)c2)cc1 Homo sapiens CHEMBL4256998 cell-based format
CHEMBL4279611 IC50 <= 100.0 nM 418.81 FC(F)(F)c1[nH]nnc1-c1ccnc(-c2cn(CCc3ccc(Cl)cc3)cn2)c1 Homo sapiens CHEMBL4256998 cell-based format
CHEMBL4293048 IC50 <= 100.0 nM 398.39 Cc1ccc(CCn2cnc(-c3cc(-c4nn[nH]c4C(F)(F)F)ccn3)c2)cc1 Homo sapiens CHEMBL4256998 cell-based format
CHEMBL4294086 IC50 <= 100.0 nM 467.46 O=C(c1ccccc1)N1CCC[C@H](n2cnc(-c3cc(-c4nn[nH]c4C(F)(F)F)ccn3)c2)C1 Homo sapiens CHEMBL4256998 cell-based format
CHEMBL4284954 IC50 <= 100.0 nM 467.46 O=C(c1ccccc1)N1CCC[C@@H](n2cnc(-c3cc(-c4nn[nH]c4C(F)(F)F)ccn3)c2)C1 Homo sapiens CHEMBL4256998 cell-based format