Q02880 | TOP2B_HUMAN | DNA topoisomerase 2-beta (TOP2B)

Pfam Domain Table

AccessionDomainRangeColor
PF00204DNA_gyraseB - DNA gyrase B287~447
PF00521DNA_topoisoIV - DNA gyrase/topoisomerase IV, subunit A734~1189
PF01751Toprim - Toprim domain477~579
PF02518HATPase_c - Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase101~197
PF08070DTHCT - DTHCT (NUC029) region1508~1610
PF16898TOPRIM_C - C-terminal associated domain of TOPRIM594~732

3D structures mapped by conservation among orthologs

[ Domain: "winged" // DNA_topoisoIV_1st ]

 PyMOL session

[ Domain: "alpha-helical domain in type II DNA topoisomerase" // DNA_topoisoIV_3rd ]

 PyMOL session

[ Domain: "SSHS domain in type II DNA topoisomerase" // TOPRIM_C ]

 PyMOL session

[ Domain: "a+b domain in type II DNA topoisomerase" // DNA_topoisoIV_2nd_1 ]

 PyMOL session

[ Domain: "a+b domain in type II DNA topoisomerase" // DNA_topoisoIV_2nd_1 ]

 PyMOL session

[ Domain: "Toprim domain" // DNA_gyraseB_C ]

 PyMOL session


[ Alpha Fold Model ] (go)



Known binders annotated in ChEMBL

 IC50 CSV
Only the first 20 rows are shown.
molecule_chembl_idstructureassay_typerelation valueunitmol_wtsmilesorganism assay_chembl_idbao_label
CHEMBL5266387 IC50 = 25.8 nM 483.55 Cc1ccc2c(=O)n(Cc3ccccc3)c(SCc3cn(-c4ccc(C(=O)O)cc4)nn3)nc2c1 Homo sapiens CHEMBL5228579 single protein format
CHEMBL49442 IC50 = 30.0 nM 412.49 O=C1c2ccccc2C(=O)c2c(NCCNCCO)ccc(NCCNCCO)c21 Homo sapiens CHEMBL4382900 single protein format
CHEMBL44657 IC50 = 69.8 nM 588.56 COc1cc([C@@H]2c3cc4c(cc3[C@@H](O[C@@H]3O[C@@H]5CO[C@@H](C)O[C@H]5[C@H](O)[C@H]3O)[C@H]3COC(=O)[C@H]23)OCO4)cc(OC)c1O Homo sapiens CHEMBL4156659 single protein format
CHEMBL4751362 IC50 = 130.0 nM 385.45 Cc1cc(NC2=NC(=O)/C(=C\c3c4ccccc4cc4ccccc34)S2)no1 Homo sapiens CHEMBL4672266 single protein format
CHEMBL5408150 IC50 = 550.0 nM 577.3 Cc1[nH]c(C(=O)Nc2ccc(C(N)=O)cc2OCc2ccc(C(=O)NCCN)cc2)c(Cl)c1Cl.Cl.Cl Homo sapiens CHEMBL5347793 single protein format
CHEMBL4213218 IC50 = 580.0 nM 507.52 O=C(CN1CCN(c2cc3c(cc2F)c(=O)c(C(=O)O)cn3C2CC2)CC1)N/N=C/c1ccccc1O Homo sapiens CHEMBL4198805 single protein format
CHEMBL53463 IC50 = 727.0 nM 543.53 COc1cccc2c1C(=O)c1c(O)c3c(c(O)c1C2=O)C[C@@](O)(C(=O)CO)C[C@@H]3O[C@H]1C[C@H](N)[C@H](O)[C@H](C)O1 Homo sapiens CHEMBL4672266 single protein format
CHEMBL4205327 IC50 = 860.0 nM 530.56 O=C(CN1CCN(c2cc3c(cc2F)c(=O)c(C(=O)O)cn3C2CC2)CC1)N/N=C/c1cc2ccccc2[nH]1 Homo sapiens CHEMBL4198805 single protein format