P45452 | MMP13_HUMAN | Collagenase 3 (MMP13)

Pfam Domain Table

AccessionDomainRangeColor
PF00045Hemopexin - Hemopexin290~332
PF00045Hemopexin - Hemopexin334~376
PF00045Hemopexin - Hemopexin382~428
PF00045Hemopexin - Hemopexin431~471
PF00413Peptidase_M10 - Matrixin112~267
PF01471PG_binding_1 - Putative peptidoglycan binding domain33~91

3D structures mapped by conservation among orthologs

[ Domain: "4-bladed" // Hemopexin ]

 PyMOL session

[ Domain: "Metalloproteases ("zincins") catalytic domain" // Peptidase_M10 ]

 PyMOL session


[ Alpha Fold Model ] (go)



Known binders annotated in ChEMBL

 IC50 CSV    Ki CSV
Only the first 20 rows are shown.
molecule_chembl_idstructureassay_typerelation valueunitmol_wtsmilesorganism assay_chembl_idbao_label
CHEMBL3337899 IC50 = 0.0022 nM 492.51 COc1cccc(CNC(=O)c2nc3scc(CNC(=O)c4ccc(C(=O)O)cc4)c3c(=O)[nH]2)c1 Homo sapiens CHEMBL3373425 single protein format
CHEMBL3932562 IC50 = 0.0032 nM 549.61 CC(C)[C@H](NS(=O)(=O)c1ccc(-c2cccc(CNC(=O)c3nc4ccccc4c(=O)[nH]3)c2)cc1)C(=O)NO Homo sapiens CHEMBL3868397 single protein format
CHEMBL3359091 IC50 = 0.0039 nM 491.48 COc1cccc(CNC(=O)c2nc3ccc(F)c(OCCc4ccc(C(=O)O)cc4)c3c(=O)[nH]2)c1 Homo sapiens CHEMBL3388707 single protein format
CHEMBL3337897 IC50 = 0.005 nM 492.51 COc1cccc(CNC(=O)c2nc3scc(CC(=O)Nc4ccc(C(=O)O)cc4)c3c(=O)[nH]2)c1 Homo sapiens CHEMBL3373425 single protein format
CHEMBL2064547 IC50 = 0.006 nM 429.47 COc1ccc(S(=O)(=O)N(Cc2cn(CCF)nn2)[C@@H](C(=O)NO)C(C)C)cc1 Homo sapiens CHEMBL2066883 single protein format
CHEMBL3337894 IC50 = 0.0069 nM 479.51 COc1cccc(CNC(=O)c2nc3scc(COCc4ccc(C(=O)O)cc4)c3c(=O)[nH]2)c1 Homo sapiens CHEMBL3373425 single protein format
CHEMBL3337901 IC50 = 0.0077 nM 492.51 COc1cccc(CNC(=O)c2nc3scc(C(=O)NCc4ccc(C(=O)O)cc4)c3c(=O)[nH]2)c1 Homo sapiens CHEMBL3373425 single protein format
CHEMBL421882 IC50 = 0.008 nM 412.31 CC(C)C(NS(=O)(=O)c1ccc(-c2ccc(Br)cc2)cc1)C(=O)O Homo sapiens CHEMBL2339489 single protein format
CHEMBL3337892 IC50 = 0.015 nM 478.53 COc1cccc(CNC(=O)c2nc3scc(COCc4ccc(C(N)=O)cc4)c3c(=O)[nH]2)c1 Homo sapiens CHEMBL3373425 single protein format
CHEMBL317132 IC50 = 0.016 nM 464.91 O=C(NO)C(CCn1nnc2ccccc2c1=O)COc1ccc(-c2ccc(Cl)cc2)cc1 Homo sapiens CHEMBL716176 single protein format
CHEMBL3337898 IC50 = 0.018 nM 448.5 COc1cccc(CNC(=O)c2nc3scc(CNC(=O)c4ccccc4)c3c(=O)[nH]2)c1 Homo sapiens CHEMBL3373425 single protein format
CHEMBL3337891 IC50 = 0.018 nM 460.52 COc1cccc(CNC(=O)c2nc3scc(COCc4ccc(C#N)cc4)c3c(=O)[nH]2)c1 Homo sapiens CHEMBL3373425 single protein format
CHEMBL3337903 IC50 = 0.021 nM 492.51 COc1cccc(CNC(=O)c2nc3scc(NC(=O)Cc4ccc(C(=O)O)cc4)c3c(=O)[nH]2)c1 Homo sapiens CHEMBL3373425 single protein format
CHEMBL4087855 IC50 = 0.024 nM 506.52 O=C(NCc1cccc(OCCOc2nc[nH]n2)c1)c1nc2scc(-c3ccccc3F)c2c(=O)[nH]1 Homo sapiens CHEMBL4000924 single protein format
CHEMBL4094620 IC50 = 0.026 nM 518.56 COc1cccc(-c2csc3nc(C(=O)NCc4cccc(OCCOc5nc[nH]n5)c4)[nH]c(=O)c23)c1 Homo sapiens CHEMBL4000924 single protein format
CHEMBL3337900 IC50 = 0.026 nM 448.5 COc1cccc(CNC(=O)c2nc3scc(C(=O)NCc4ccccc4)c3c(=O)[nH]2)c1 Homo sapiens CHEMBL3373425 single protein format
CHEMBL4079123 IC50 = 0.027 nM 494.56 O=C(NCc1cccc(OCCOc2nc[nH]n2)c1)c1nc2scc(-c3cccs3)c2c(=O)[nH]1 Homo sapiens CHEMBL4000924 single protein format
CHEMBL3337896 IC50 = 0.028 nM 448.5 COc1cccc(CNC(=O)c2nc3scc(CC(=O)Nc4ccccc4)c3c(=O)[nH]2)c1 Homo sapiens CHEMBL3373425 single protein format
CHEMBL3337893 IC50 = 0.029 nM 492.56 CNC(=O)c1ccc(COCc2csc3nc(C(=O)NCc4cccc(OC)c4)[nH]c(=O)c23)cc1 Homo sapiens CHEMBL3373425 single protein format
CHEMBL2047536 IC50 = 0.03 nM 540.54 Cc1c(C(=O)O)ccc2c1CC[C@@H]2NC(=O)c1cc(C(=O)NCc2ccc3c(c2)NC(=O)CO3)nc2ccnn12 Homo sapiens CHEMBL2050091 single protein format