P11388 | TOP2A_HUMAN | DNA topoisomerase 2-alpha (TOP2A)

Pfam Domain Table

AccessionDomainRangeColor
PF00204DNA_gyraseB - DNA gyrase B266~426
PF00521DNA_topoisoIV - DNA gyrase/topoisomerase IV, subunit A713~1171
PF01751Toprim - Toprim domain456~558
PF02518HATPase_c - Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase80~176
PF08070DTHCT - DTHCT (NUC029) region1435~1522
PF16898TOPRIM_C - C-terminal associated domain of TOPRIM573~711

3D structures mapped by conservation among orthologs

[ Domain: "winged" // DNA_topoisoIV_1st ]

 PyMOL session

[ Domain: "alpha-helical domain in type II DNA topoisomerase" // DNA_topoisoIV_3rd ]

 PyMOL session

[ Domain: "Ribosomal protein S5 domain 2-like" // DNA_gyraseB ]

 PyMOL session

[ Domain: "ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase" // HATPase_c_1 ]

 PyMOL session

[ Domain: "SSHS domain in type II DNA topoisomerase" // TOPRIM_C ]

 PyMOL session

[ Domain: "a+b domain in type II DNA topoisomerase" // DNA_topoisoIV_2nd_1 ]

 PyMOL session

[ Domain: "Toprim domain" // DNA_gyraseB_C ]

 PyMOL session


[ Alpha Fold Model ] (go)



Known binders annotated in ChEMBL

 IC50 CSV
Only the first 20 rows are shown.
molecule_chembl_idstructureassay_typerelation valueunitmol_wtsmilesorganism assay_chembl_idbao_label
CHEMBL440125 IC50 = 0.21 nM 364.35 COc1ccc(-c2c3c(cc4cc5c(cc24)OCO5)C(=O)OC3)cc1OC Homo sapiens CHEMBL5391401 single protein format
CHEMBL1117 IC50 = 2.6 nM 497.5 CC(=O)[C@]1(O)Cc2c(O)c3c(c(O)c2[C@@H](O[C@H]2C[C@H](N)[C@H](O)[C@H](C)O2)C1)C(=O)c1ccccc1C3=O Homo sapiens CHEMBL5391401 single protein format
CHEMBL417 IC50 = 3.0 nM 543.53 COc1cccc2c1C(=O)c1c(O)c3c(c(O)c1C2=O)C[C@@](O)(C(=O)CO)C[C@@H]3O[C@H]1C[C@H](N)[C@@H](O)[C@H](C)O1 Homo sapiens CHEMBL5391401 single protein format
CHEMBL178 IC50 = 10.0 nM 527.53 COc1cccc2c1C(=O)c1c(O)c3c(c(O)c1C2=O)C[C@@](O)(C(C)=O)C[C@@H]3O[C@H]1C[C@H](N)[C@H](O)[C@H](C)O1 Homo sapiens CHEMBL5391401 single protein format
CHEMBL346068 IC50 = 60.0 nM 481.48 N[C@@H]1CCN(c2c(F)cc3c(=O)c(C(=O)O)cn4c3c2Oc2c-4ccc3c2ccc2ccccc23)C1 Homo sapiens CHEMBL1050089 single protein format
CHEMBL2296491 IC50 = 76.0 nM 377.47 CCC(=O)NCCC1=C(SC)C(=O)c2nccc3c2c1nc1ccccc13 Homo sapiens CHEMBL3074820 single protein format
CHEMBL2296492 IC50 = 125.0 nM 373.46 COc1cc(CCNC(=O)C=C(C)C)c2c3c(ccnc13)-c1ccccc1N2 Homo sapiens CHEMBL3074820 single protein format
CHEMBL2296490 IC50 = 132.0 nM 347.37 COC1=C(CCNC(C)=O)c2nc3ccccc3c3ccnc(c23)C1=O Homo sapiens CHEMBL3074820 single protein format
CHEMBL4463643 IC50 = 200.0 nM 318.33 CC(=O)Nc1ccc2c(-c3cc4ccccc4o3)ccnc2c1O Homo sapiens CHEMBL4324042 single protein format
CHEMBL164 IC50 = 390.0 nM 318.24 O=c1c(O)c(-c2cc(O)c(O)c(O)c2)oc2cc(O)cc(O)c12 Homo sapiens CHEMBL3056567 single protein format
CHEMBL2296496 IC50 = 592.0 nM 399.45 C/C=C(\C)C(=O)C(CNCC=O)C1=CC(=O)c2nccc3c2c1nc1ccccc13 Homo sapiens CHEMBL3074820 single protein format
CHEMBL2296497 IC50 = 592.0 nM 399.45 CC(C)=CC(=O)C(CNCC=O)C1=CC(=O)c2nccc3c2c1nc1ccccc13 Homo sapiens CHEMBL3074820 single protein format
CHEMBL4527023 IC50 = 600.0 nM 411.43 O=C(CCN1CCOCC1)Nc1ccc2c(-c3cc(F)ccc3O)ccnc2c1O Homo sapiens CHEMBL4324042 single protein format
CHEMBL2296494 IC50 = 639.0 nM 417.47 CC(C)(O)CC(=O)C(CNCC=O)C1=CC(=O)c2nccc3c2c1nc1ccccc13 Homo sapiens CHEMBL3074820 single protein format
CHEMBL5408150 IC50 = 670.0 nM 577.3 Cc1[nH]c(C(=O)Nc2ccc(C(N)=O)cc2OCc2ccc(C(=O)NCCN)cc2)c(Cl)c1Cl.Cl.Cl Homo sapiens CHEMBL5347792 single protein format
CHEMBL1305588 IC50 = 680.0 nM 267.34 c1ccc2c(c1)nc(NC1CCCCC1)c1nncn12 Homo sapiens CHEMBL4271923 single protein format
CHEMBL4552030 IC50 = 700.0 nM 346.31 CC(=O)Nc1ccc2c(-c3ccc(C(F)(F)F)cc3)ccnc2c1O Homo sapiens CHEMBL4324042 single protein format
CHEMBL155344 IC50 = 700.0 nM 481.48 N[C@H]1CCN(c2c(F)cc3c(=O)c(C(=O)O)cn4c3c2Oc2c-4ccc3c2ccc2ccccc23)C1 Homo sapiens CHEMBL1050089 single protein format
CHEMBL5414329 IC50 = 730.0 nM 490.61 CCc1nc2nc(Nc3ccc4nc(OCCN5CCOCC5)ccc4c3)nc(NC(C)(C)C)c2[nH]1 Homo sapiens CHEMBL5347792 single protein format
CHEMBL4288104 IC50 = 850.0 nM 405.44 COc1cccc(NC(=O)CSc2nnc3c4nncn4c4ccccc4n23)c1 Homo sapiens CHEMBL4271923 single protein format