O94953 | KDM4B_HUMAN | Lysine-specific demethylase 4B (KDM4B)

Pfam Domain Table

AccessionDomainRangeColor
PF02373JmjC - JmjC domain, hydroxylase176~292
PF02375JmjN - jmjN domain16~50
PF13831PHD_2 - PHD-finger754~789
PF13832zf-HC5HC2H_2 - PHD-zinc-finger like domain796~906
PF18104Tudor_2 - Jumonji domain-containing protein 2A Tudor domain922~956
PF18104Tudor_2 - Jumonji domain-containing protein 2A Tudor domain980~1014

3D structures mapped by conservation among orthologs

[ Domain: "SH3" // LBR_tudor_1 ]

 PyMOL session

[ Domain: "Double-stranded beta-helix" // JmjC ]

 PyMOL session


[ Alpha Fold Model ] (go)



Known binders annotated in ChEMBL

 IC50 CSV
Only the first 20 rows are shown.
molecule_chembl_idstructureassay_typerelation valueunitmol_wtsmilesorganism assay_chembl_idbao_label
CHEMBL3785491 IC50 = 10.0 nM 382.46 O=C(NCCCc1ccccc1)c1cccc(-c2cc(O)c3ncccc3c2)c1 Homo sapiens CHEMBL3791427 cell-based format
CHEMBL4438830 IC50 = 12.0 nM 471.61 CN(C)CCc1cccc(C2CCN(CCc3cnn(-c4nccc5c(=O)[nH]cnc45)c3)CC2)c1 Homo sapiens CHEMBL4353711 single protein format
CHEMBL4440395 IC50 = 15.0 nM 513.65 O=c1[nH]cnc2c(-n3cc(CCN4CCC(c5cccc(CCN6CCOCC6)c5)CC4)cn3)nccc12 Homo sapiens CHEMBL4353689 cell-based format
CHEMBL3775894 IC50 = 17.0 nM 469.38 O=c1[nH]cnc2c(-n3cc(CCN4CCC(c5cc(Cl)cc(Cl)c5)CC4)cn3)nccc12 Homo sapiens CHEMBL3778806 cell-based format
CHEMBL4466130 IC50 = 18.0 nM 513.65 O=c1[nH]cnc2c(-n3cc(CCN4CCC(c5ccc(CCN6CCOCC6)cc5)CC4)cn3)nccc12 Homo sapiens CHEMBL4353689 cell-based format
CHEMBL4592908 IC50 = 19.0 nM 483.62 O=c1[nH]cnc2c(-n3cc(CCN4CCC(c5cccc(CN6CCCC6)c5)CC4)cn3)nccc12 Homo sapiens CHEMBL4353689 cell-based format
CHEMBL4585876 IC50 = 20.0 nM 471.61 CN(C)CCc1ccc(C2CCN(CCc3cnn(-c4nccc5c(=O)[nH]cnc45)c3)CC2)cc1 Homo sapiens CHEMBL4353689 cell-based format
CHEMBL4590283 IC50 = 20.0 nM 477.57 O=c1[nH]cnc2c(-n3cc(CCN4CCC(c5ccc(-c6ccncc6)cc5)CC4)cn3)nccc12 Homo sapiens CHEMBL4353689 cell-based format
CHEMBL4559561 IC50 = 24.0 nM 477.57 O=c1[nH]cnc2c(-n3cc(CCN4CCC(c5ccc(-c6cccnc6)cc5)CC4)cn3)nccc12 Homo sapiens CHEMBL4353689 cell-based format
CHEMBL4567766 IC50 = 27.0 nM 477.57 O=c1[nH]cnc2c(-n3cc(CCN4CCC(c5cccc(-c6cccnc6)c5)CC4)cn3)nccc12 Homo sapiens CHEMBL4353689 cell-based format
CHEMBL3775668 IC50 = 29.0 nM 406.52 O=c1[nH]cnc2c(-n3cc(CCN4CCC(c5cccs5)CC4)cn3)nccc12 Homo sapiens CHEMBL3778806 cell-based format
CHEMBL4573390 IC50 = 29.0 nM 448.96 CC1(c2cccc(Cl)c2)CCN(CCc2cnn(-c3nccc4c(=O)[nH]cnc34)c2)CC1 Homo sapiens CHEMBL4353689 cell-based format
CHEMBL3774537 IC50 = 31.0 nM 434.93 O=c1[nH]cnc2c(-n3cc(CCN4CCC(c5cccc(Cl)c5)CC4)cn3)nccc12 Homo sapiens CHEMBL3778806 cell-based format
CHEMBL4438034 IC50 = 32.0 nM 478.56 O=c1[nH]cnc2c(-n3cc(CCN4CCC(c5ccc(-c6cncnc6)cc5)CC4)cn3)nccc12 Homo sapiens CHEMBL4353689 cell-based format
CHEMBL4447515 IC50 = 32.0 nM 418.48 O=c1[nH]cnc2c(-n3cc(CCN4CCC(c5cccc(F)c5)CC4)cn3)nccc12 Homo sapiens CHEMBL4353689 cell-based format
CHEMBL4516101 IC50 = 33.0 nM 551.62 O=c1[nH]cnc2c(-n3cc(CCN4CCC(c5cc(CN6CCCC6)cc(C(F)(F)F)c5)CC4)cn3)nccc12 Homo sapiens CHEMBL4353689 cell-based format
CHEMBL4561958 IC50 = 33.0 nM 477.57 O=c1[nH]cnc2c(-n3cc(CCN4CCC(c5cccc(-c6ccccn6)c5)CC4)cn3)nccc12 Homo sapiens CHEMBL4353689 cell-based format
CHEMBL3775121 IC50 = 36.0 nM 436.47 O=c1[nH]cnc2c(-n3cc(CCN4CCC(c5ccc(F)cc5F)CC4)cn3)nccc12 Homo sapiens CHEMBL3778806 cell-based format
CHEMBL3775548 IC50 = 39.0 nM 468.48 O=c1[nH]cnc2c(-n3cc(CCN4CCC(c5cccc(C(F)(F)F)c5)CC4)cn3)nccc12 Homo sapiens CHEMBL3778806 cell-based format
CHEMBL3775545 IC50 = 39.0 nM 430.51 COc1ccc(C2CCN(CCc3cnn(-c4nccc5c(=O)[nH]cnc45)c3)CC2)cc1 Homo sapiens CHEMBL3778806 cell-based format