O60341 | KDM1A_HUMAN | Lysine-specific histone demethylase 1A (KDM1A)

Pfam Domain Table

AccessionDomainRangeColor
PF01593Amino_oxidase - Flavin containing amine oxidoreductase288~825
PF04433SWIRM - SWIRM domain184~264

3D structures mapped by conservation among orthologs

[ Domain: "tri-helical" // SWIRM ]

 PyMOL session

[ Domain: "FAD-linked reductases-C" // Amino_oxidase_2nd ]

 PyMOL session

[ Domain: "FAD/NAD(P)-binding domain" // Amino_oxidase_1st ]

 PyMOL session


[ Alpha Fold Model ] (go)



Known binders annotated in ChEMBL

 IC50 CSV    Ki CSV
Only the first 20 rows are shown.
molecule_chembl_idstructureassay_typerelation valueunitmol_wtsmilesorganism assay_chembl_idbao_label
CHEMBL4798849 IC50 = 0.05 nM 494.64 Cn1c(C(=O)Nc2cccc3c2N(Cc2ccc(OC4CCNCC4)cc2)CCC3)cc2ccccc21 Homo sapiens CHEMBL4686623 single protein format
CHEMBL4762799 IC50 = 0.06 nM 526.66 O=C(Nc1cccc2c1N(Cc1ccc(OC3CCNCC3)cc1)CCC2)c1cc2ccccc2n1CCF Homo sapiens CHEMBL4686623 single protein format
CHEMBL4639944 IC50 = 0.1 nM 474.67 Cn1c(-c2nc(C3CCC3)cn2CCCc2ccc(OC3CCNCC3)cc2)cc2sccc21 Homo sapiens CHEMBL4615777 assay format
CHEMBL4785635 IC50 = 0.1 nM 519.67 CCOCc1cccc(NC(=O)c2cc3sccc3n2C)c1COc1ccc(OC[C@H]2CCNC2)cc1 Homo sapiens CHEMBL4686623 single protein format
CHEMBL4632810 IC50 = 0.13 nM 478.66 CCCc1cn(CCOc2ccc(OC3CCCNCC3)cc2)c(-c2cc3sccc3n2C)n1 Homo sapiens CHEMBL4615777 assay format
CHEMBL4639941 IC50 = 0.13 nM 476.69 CCCc1cn(CCCc2ccc(OC3CCCNCC3)cc2)c(-c2cc3sccc3n2C)n1 Homo sapiens CHEMBL4615777 assay format
CHEMBL4802155 IC50 = 0.14 nM 336.4 Nc1nnc(CN[C@@H]2C[C@H]2c2ccc(OCc3ccccc3)cc2)o1 Homo sapiens CHEMBL5127903 single protein format
CHEMBL4641768 IC50 = 0.14 nM 476.69 CCCc1cn(CCCc2ccc(OCC3CCNCC3)cc2)c(-c2cc3sccc3n2C)n1 Homo sapiens CHEMBL4615777 assay format
CHEMBL4776575 IC50 = 0.15 nM 508.67 CCn1c(C(=O)Nc2cccc3c2N(Cc2ccc(OC4CCNCC4)cc2)CCC3)cc2ccccc21 Homo sapiens CHEMBL4686623 single protein format
CHEMBL4776338 IC50 = 0.15 nM 543.11 O=C(Nc1cccc2c1N(Cc1ccc(OC3CCNCC3)cc1)CCC2)c1cc2ccccc2n1CCCl Homo sapiens CHEMBL4686623 single protein format
CHEMBL4642214 IC50 = 0.16 nM 488.7 Cn1c(-c2nc(C3CCC3)cn2CCCc2ccc(OC3CCCNCC3)cc2)cc2sccc21 Homo sapiens CHEMBL4615777 assay format
CHEMBL4635889 IC50 = 0.17 nM 462.66 CCc1cn(CCCc2ccc(OC3CCCNCC3)cc2)c(-c2cc3sccc3n2C)n1 Homo sapiens CHEMBL4615777 assay format
CHEMBL4649085 IC50 = 0.18 nM 462.66 CCCc1cn(CCCc2ccc(OC3CCNCC3)cc2)c(-c2cc3sccc3n2C)n1 Homo sapiens CHEMBL4615777 assay format
CHEMBL4759347 IC50 = 0.18 nM 522.69 CC(C)n1c(C(=O)Nc2cccc3c2N(Cc2ccc(OC4CCNCC4)cc2)CCC3)cc2ccccc21 Homo sapiens CHEMBL4686623 single protein format
CHEMBL4639413 IC50 = 0.19 nM 476.65 Cn1c(-c2nc(C3CCC3)cn2CCOc2ccc(OC3CCNCC3)cc2)cc2sccc21 Homo sapiens CHEMBL4615777 assay format
CHEMBL4649563 IC50 = 0.2 nM 464.64 CCCc1cn(CCOc2ccc(OC3CCNCC3)cc2)c(-c2cc3sccc3n2C)n1 Homo sapiens CHEMBL4615777 assay format
CHEMBL4645937 IC50 = 0.21 nM 490.67 Cn1c(-c2nc(C3CCC3)cn2CCOc2ccc(OC3CCCNCC3)cc2)cc2sccc21 Homo sapiens CHEMBL4615777 assay format
CHEMBL4634153 IC50 = 0.25 nM 488.7 Cn1c(-c2nc(C3CCC3)cn2CCCc2ccc(OCC3CCNCC3)cc2)cc2sccc21 Homo sapiens CHEMBL4615777 assay format
CHEMBL4642738 IC50 = 0.27 nM 448.64 CCc1cn(CCCc2ccc(OC3CCNCC3)cc2)c(-c2cc3sccc3n2C)n1 Homo sapiens CHEMBL4615777 assay format
CHEMBL4637660 IC50 = 0.28 nM 448.64 CCc1cn(CCCc2ccc(OCC3CCNC3)cc2)c(-c2cc3sccc3n2C)n1 Homo sapiens CHEMBL4615777 assay format