O43175 | SERA_HUMAN | D-3-phosphoglycerate dehydrogenase (PHGDH)

Pfam Domain Table

AccessionDomainRangeColor
PF003892-Hacid_dh - D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain9~111
PF003892-Hacid_dh - D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain286~317
PF028262-Hacid_dh_C - D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain112~285
PF19304PGDH_inter - D-3-phosphoglycerate dehydrogenase intervening domain330~409

3D structures mapped by conservation among orthologs

[ Domain: "NAD(P)-binding Rossmann-fold domains" // 2-Hacid_dh_C ]

 PyMOL session

[ Domain: "Formate/glycerate dehydrogenase catalytic domain-like" // 2-Hacid_dh ]

 PyMOL session


[ Alpha Fold Model ] (go)



Known binders annotated in ChEMBL

 IC50 CSV    Ki CSV
Only the first 20 rows are shown.
molecule_chembl_idstructureassay_typerelation valueunitmol_wtsmilesorganism assay_chembl_idbao_label
CHEMBL4541133 IC50 = 0.3 nM 541.45 COC(=O)C(C)(C)S(=O)(=O)c1ccc([C@@H](CO)NC(=O)c2cc3c(Cl)c(Cl)c(C)cc3n2C)cc1 Homo sapiens CHEMBL4477151 cell-based format
CHEMBL4584313 IC50 = 1.6 nM 476.98 COC(=O)C(C)S(=O)(=O)c1ccc([C@@H](C)NC(=O)c2cc3c(Cl)cc(C)cc3n2C)cc1 Homo sapiens CHEMBL4477151 cell-based format
CHEMBL4436264 IC50 = 2.0 nM 483.37 Cc1cc2c(cc(C(=O)N[C@H](C)c3ccc(S(=O)(=O)CC(=O)O)cc3)n2C)c(Cl)c1Cl Homo sapiens CHEMBL4375167 single protein format
CHEMBL4520837 IC50 = 3.0 nM 499.37 Cc1cc2c(cc(C(=O)N[C@H](CO)c3ccc(S(=O)(=O)CC(=O)O)cc3)n2C)c(Cl)c1Cl Homo sapiens CHEMBL4375168 single protein format
CHEMBL4527607 IC50 = 3.0 nM 483.37 Cc1cc2c(cc(C(=O)N[C@H](CO)c3ccc([S+]([O-])CC(=O)O)cc3)n2C)c(Cl)c1Cl Homo sapiens CHEMBL4477153 assay format
CHEMBL4467246 IC50 = 3.0 nM 448.93 Cc1cc(Cl)c2cc(C(=O)N[C@H](C)c3ccc(S(=O)(=O)CC(=O)O)cc3)n(C)c2c1 Homo sapiens CHEMBL4375167 single protein format
CHEMBL4515492 IC50 = 3.0 nM 483.37 Cc1cc2c(cc(C(=O)N[C@H](CO)c3ccc([S@+]([O-])CC(=O)O)cc3)n2C)c(Cl)c1Cl Homo sapiens CHEMBL4477153 assay format
CHEMBL4540875 IC50 = 3.7 nM 533.05 COC(=O)C1(S(=O)(=O)c2ccc([C@@H](C)NC(=O)c3cc4c(Cl)cc(C)cc4n3C)cc2)CCOCC1 Homo sapiens CHEMBL4477151 cell-based format
CHEMBL4521661 IC50 = 3.9 nM 491.01 CCOC(=O)C(C)S(=O)(=O)c1ccc([C@@H](C)NC(=O)c2cc3c(Cl)cc(C)cc3n2C)cc1 Homo sapiens CHEMBL4477151 cell-based format
CHEMBL4542437 IC50 = 4.0 nM 527.43 Cc1cc2c(cc(C(=O)N[C@H](CO)c3ccc(S(=O)(=O)C(C)(C)C(=O)O)cc3)n2C)c(Cl)c1Cl Homo sapiens CHEMBL4477153 assay format
CHEMBL4587306 IC50 = 5.0 nM 511.43 Cc1cc2c(cc(C(=O)N[C@H](C)c3ccc(S(=O)(=O)C(C)(C)C(=O)O)cc3)n2C)c(Cl)c1Cl Homo sapiens CHEMBL4477153 assay format
CHEMBL4483622 IC50 = 5.0 nM 482.92 Cc1cc2c(cc(C(=O)N[C@H](CO)c3ccc(S(=O)(=O)CC(=O)O)cc3)n2C)c(Cl)c1F Homo sapiens CHEMBL4477153 assay format
CHEMBL4548014 IC50 = 5.0 nM 466.92 Cc1cc2c(cc(C(=O)N[C@H](C)c3ccc(S(=O)(=O)CC(=O)O)cc3)n2C)c(Cl)c1F Homo sapiens CHEMBL4477153 assay format
CHEMBL4533417 IC50 = 6.0 nM 464.93 Cc1cc(Cl)c2cc(C(=O)N[C@H](CO)c3ccc(S(=O)(=O)CC(=O)O)cc3)n(C)c2c1 Homo sapiens CHEMBL4477153 assay format
CHEMBL4547034 IC50 = 6.0 nM 491.01 CCCC(C(=O)O)S(=O)(=O)c1ccc([C@@H](C)NC(=O)c2cc3c(Cl)cc(C)cc3n2C)cc1 Homo sapiens CHEMBL4477153 assay format
CHEMBL4483483 IC50 = 6.0 nM 503.02 Cc1cc(Cl)c2cc(C(=O)N[C@H](C)c3ccc(S(=O)(=O)C4(C(=O)O)CCCC4)cc3)n(C)c2c1 Homo sapiens CHEMBL4477153 assay format
CHEMBL4548203 IC50 = 7.0 nM 519.02 Cc1cc(Cl)c2cc(C(=O)N[C@H](C)c3ccc(S(=O)(=O)C4(C(=O)O)CCOCC4)cc3)n(C)c2c1 Homo sapiens CHEMBL4477153 assay format
CHEMBL4560976 IC50 = 7.0 nM 483.37 Cc1cc2c(cc(C(=O)N[C@H](CO)c3ccc([S@@+]([O-])CC(=O)O)cc3)n2C)c(Cl)c1Cl Homo sapiens CHEMBL4477153 assay format
CHEMBL4585012 IC50 = 8.0 nM 448.93 Cc1cc(Cl)c2cc(C(=O)N[C@H](CO)c3ccc([S+]([O-])CC(=O)O)cc3)n(C)c2c1 Homo sapiens CHEMBL4477153 assay format
CHEMBL4580665 IC50 = 8.0 nM 462.96 Cc1cc(Cl)c2cc(C(=O)N[C@H](C)c3ccc(S(=O)(=O)C(C)C(=O)O)cc3)n(C)c2c1 Homo sapiens CHEMBL4477153 assay format