O15054 | KDM6B_HUMAN | Lysine-specific demethylase 6B (KDM6B)

Pfam Domain Table

AccessionDomainRangeColor
PF02373JmjC - JmjC domain, hydroxylase1377~1485
PF21322KDM6_C-hel - Lysine-specific demethylase 6/UTY, C-terminal helical domain1492~1547
PF21326KDM6_GATAL - KDM6, GATA-like1564~1623

3D structures mapped by conservation among orthologs

[ Domain: "Double-stranded beta-helix" // JmjC_1 ]

 PyMOL session

[ Domain: "C-terminal helical domain in Jumonji domain-containing histone demethylases" // KOG1246_2nd ]

 PyMOL session

[ Domain: "LIM domain-like" // KOG1246_3rd ]

 PyMOL session


[ Alpha Fold Model ] (go)



Known binders annotated in ChEMBL

 IC50 CSV
Only the first 20 rows are shown.
molecule_chembl_idstructureassay_typerelation valueunitmol_wtsmilesorganism assay_chembl_idbao_label
CHEMBL1230640 IC50 = 140.0 nM 189.17 O=C(O)c1ccc(O)c2ncccc12 Homo sapiens CHEMBL3112251 single protein format
CHEMBL3188597 IC50 = 150.0 nM 389.46 O=C(O)CCNc1cc(N2CCc3ccccc3CC2)nc(-c2ccccn2)n1 Homo sapiens CHEMBL3757620 single protein format
CHEMBL3753391 IC50 = 150.0 nM 378.44 O=C(O)CCNc1nc(N2CCc3ccccc3CC2)cc(-n2cccn2)n1 Homo sapiens CHEMBL3757620 single protein format
CHEMBL3752893 IC50 = 200.0 nM 395.49 O=C(O)CCNc1nc(-c2nccs2)cc(N2CCc3ccccc3CC2)n1 Homo sapiens CHEMBL3757620 single protein format
CHEMBL3752179 IC50 = 210.0 nM 379.42 O=C(O)CCNc1nc(N2CCc3ccccc3CC2)cc(-n2ccnn2)n1 Homo sapiens CHEMBL3757620 single protein format
CHEMBL3753740 IC50 = 270.0 nM 379.42 O=C(O)CCNc1nc(N2CCc3ccccc3CC2)cc(-n2nccn2)n1 Homo sapiens CHEMBL3757620 single protein format
CHEMBL278315 IC50 = 400.0 nM 560.64 COC1=C2C[C@@H](C)C[C@H](OC)[C@H](O)[C@@H](C)/C=C(\C)[C@H](OC(N)=O)[C@@H](OC)/C=C\C=C(/C)C(=O)NC(=CC1=O)C2=O Homo sapiens CHEMBL5141192 single protein format
CHEMBL109480 IC50 = 400.0 nM 585.7 C=CCNC1=C2C[C@@H](C)C[C@H](OC)[C@H](O)[C@@H](C)/C=C(\C)[C@H](OC(N)=O)[C@@H](OC)/C=C\C=C(/C)C(=O)NC(=CC1=O)C2=O Homo sapiens CHEMBL5141192 single protein format
CHEMBL3752769 IC50 = 490.0 nM 364.41 O=C(O)CCNc1nc(N2CCc3ccccc3C2)cc(-n2cccn2)n1 Homo sapiens CHEMBL3757620 single protein format
CHEMBL3752835 IC50 = 550.0 nM 411.44 O=C(O)CCNc1nc(N2CCN(c3ccc(F)cc3)CC2)cc(-n2cccn2)n1 Homo sapiens CHEMBL3757620 single protein format
CHEMBL3752143 IC50 = 600.0 nM 428.49 O=C(O)CCNc1nc(-c2nccs2)cc(N2CCN(c3ccc(F)cc3)CC2)n1 Homo sapiens CHEMBL3757620 single protein format
CHEMBL3752551 IC50 = 740.0 nM 462.34 O=C(O)CCNc1nc(N2CCN(c3ccc(Cl)c(Cl)c3)CC2)cc(-n2cccn2)n1 Homo sapiens CHEMBL3757620 single protein format
CHEMBL3753449 IC50 = 750.0 nM 392.46 O=C(O)CCNc1nc(N2CCC(c3ccccc3)CC2)cc(-n2cccn2)n1 Homo sapiens CHEMBL3757620 single protein format
CHEMBL1982368 IC50 = 860.0 nM 308.77 Clc1ccc(N/N=C(\c2ccccc2)c2ccccn2)nc1 Homo sapiens CHEMBL5237467 single protein format
CHEMBL3752294 IC50 = 900.0 nM 411.49 O=C(O)CCNc1nc(-c2nccs2)cc(N2CCN(c3ccccn3)CC2)n1 Homo sapiens CHEMBL3757620 single protein format
CHEMBL3752343 IC50 = 940.0 nM 479.39 O=C(O)CCNc1nc(-c2nccs2)cc(N2CCN(c3ccc(Cl)c(Cl)c3)CC2)n1 Homo sapiens CHEMBL3757620 single protein format
CHEMBL3753199 IC50 = 990.0 nM 381.46 O=C(O)CCNc1nc(-c2nccs2)cc(N2CCc3ccccc3C2)n1 Homo sapiens CHEMBL3757620 single protein format
CHEMBL3774692 IC50 = 1000.0 nM 221.24 Nc1nc(-c2cc(C(=O)O)ccn2)cs1 Homo sapiens CHEMBL3776391 single protein format
CHEMBL4280291 IC50 = 1000.0 nM 402.36 Fc1ccc(CCn2cnc(-c3cc(-c4nn[nH]c4C(F)(F)F)ccn3)c2)cc1 Homo sapiens CHEMBL4257004 cell-based format
CHEMBL4293697 IC50 = 1000.0 nM 402.36 Fc1cccc(CCn2cnc(-c3cc(-c4nn[nH]c4C(F)(F)F)ccn3)c2)c1 Homo sapiens CHEMBL4257004 cell-based format